BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C02LP1|AL429702
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1104 1058 0.0
3x_Contig1457 502 e-142
>3x_Contig1104
Length = 4895
Score = 1058 bits (533), Expect = 0.0
Identities = 534/535 (99%)
Strand = Plus / Plus
Query: 335 aaaggcacttccttttctcaaagagagcacctgcgttgttggaaaaggagttttgtgcga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 aaaggcacttccttttctcaaagagagcacctgcgttgttggaaaaggagttttgtgcga 66
Query: 395 agttacattccgttaatattctgttggggaaggtaaagggtatttgamacttgacaaagt 454
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 67 agttacattccgttaatattctgttggggaaggtaaagggtatttgaaacttgacaaagt 126
Query: 455 gaggaaagcaccgaatacttgctagctttatagtcgaacccttgtgtcagtggagcatca 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gaggaaagcaccgaatacttgctagctttatagtcgaacccttgtgtcagtggagcatca 186
Query: 515 gcctttcataacatcattcagcaaaacaagttgagattcatttagggttggaataaagag 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gcctttcataacatcattcagcaaaacaagttgagattcatttagggttggaataaagag 246
Query: 575 acaaaaagagtatcccctactgtaaaatttctcttaacaagaagctttttgcaaagttta 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 acaaaaagagtatcccctactgtaaaatttctcttaacaagaagctttttgcaaagttta 306
Query: 635 cctctagaggtctaacttagagcacagtaaaccgcaaattagagataggcacaatagcgt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cctctagaggtctaacttagagcacagtaaaccgcaaattagagataggcacaatagcgt 366
Query: 695 acgggagtgcaaacttcatccaatataaaacagaaacaaaaagaagatgctcggaggtgg 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 acgggagtgcaaacttcatccaatataaaacagaaacaaaaagaagatgctcggaggtgg 426
Query: 755 cattgatgatacaatgattgctcatggctcatcgatttatctagacgataacggtgccta 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cattgatgatacaatgattgctcatggctcatcgatttatctagacgataacggtgccta 486
Query: 815 ccccaaacgacttaggacatctttgtcaaaaattatggacaagcaactggattac 869
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ccccaaacgacttaggacatctttgtcaaaaattatggacaagcaactggattac 541
>3x_Contig1457
Length = 7441
Score = 502 bits (253), Expect = e-142
Identities = 268/271 (98%), Gaps = 2/271 (0%)
Strand = Plus / Plus
Query: 1 gatctgctgattttagtaacgttatgwcctaaaagggtaatttgtaaacattgtctgttt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7172 gatctgctgattttagtaacgttatgtcctaaaagggtaatttgtaaacattgtctgttt 7231
Query: 61 tctttacttaaacatgtcgaaagcgatgagcagtcggattcggtaacacagttcccacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7232 tctttacttaaacatgtcgaaagcgatgagcagtcggattcggtaacacagttcccacaa 7291
Query: 121 acggaagagaaagagggtagatgaagttgtgagttttggatc-ctacccattttaaggat 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7292 acggaagagaaagagggtagatgaagttgtgagttttggatcactacccattttaaggat 7351
Query: 180 ttttttctttgagcttaacaaaagtatttcaactattgttatacgaggtgattttcttaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 7352 ttttttctttgagcttaacaaaagtatttcaactattgttatacgaggtga-tttcttaa 7410
Query: 240 gtttagttattctctgccttcatcgaaatca 270
|||||||||||||||||||||||||||||||
Sbjct: 7411 gtttagttattctctgccttcatcgaaatca 7441
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6665
Number of Sequences: 1807
Number of extensions: 6665
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)